[{"structure":[{"name":"New Folder","values":[{"report_name":"Area test","report_heading":"Area test",},{"report_name":"multi same","report_heading":"multi same",},]}]}]

db.collection.update({"structure.name":"New Folder"},{"$pull":{"structure.$[structure].values":{"report_name":"Area test"}}},{arrayFilters:[{"structure.name":"New Folder"}]})