Database

[{"_id":{"$oid":"605fdb8d933c5f50b4d2225e"},"id":"mr9pwc","username":"recrimination-logistical","upvotes":{"$numberInt":"0"},"downvotes":{"$numberInt":"0"},"text":"Top-level comment","date":{"$date":{"$numberLong":"1616894861300"}},"replies":[{"id":"dflu1h","username":"patrolman-hurt","upvotes":{"$numberInt":"0"},"downvotes":{"$numberInt":"0"},"text":"Testing reply level 1!","date":{"$date":{"$numberLong":"1618387567042"}},"replies":[]/** ----> want to add a reply here*/}]}]

Query

db.collection.update({_id:ObjectId("605fdb8d933c5f50b4d2225e"),},{$push:{"replies.$[commentArr].replies":{id:1,text:"New comment",date:new Date(),replies:[]}}},{arrayFilters:[{"commentArr.id":"dflu1h"}]})

Result